rs31852576 SNP Detail

Summary

• ID
  rs31852576
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124924016 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGA GCAAACTGCA GTGCTCCAAA
  S
  ACAAACAATT GGGGGATCCA GGGAG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46178438	mCV23951548	ABI	CRAMUS_MOUSE	f	SNP	C	G					C		C
ss47595907	NES11178394	PERLEGEN	MM_PANEL2	f	SNP	C		G	G	C	G		C	C	G	C		G	C	G	G		G
ss145843996	ENSMUSSNP846638	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							C
ss322856629	CHEV_8_126721177	CHEVERUD	SCREENING_POP	f	SNP												C					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31852576					SNP	C	G	G	G	C	G	C	C	C	G	C	C	G	C	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47595907	NES11178394	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124924016 () rs orientation: forward

Symbol	Name	Function Class
Gm42054	predicted gene, 42054	within coordinates
Rr672636	regulatory region 672636	678 bp distal
Rr672637	regulatory region 672637	140 bp distal
Tssr80021	transcription start site region 80021	154 bp downstream
Tssr80022	transcription start site region 80022	123 bp downstream