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rs31850928 SNP Detail
Summary
  • ID
    rs31850928
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr8:124923624 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          TCGCT GCACCTGCCT CTAGCTCTGA
    R
    AGAACTAAGT AAGGTCAGGT TTGTA                                      
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
PWD/PhJ
SM/J
WSB/EiJ
ss46195790 mCV23951539 ABI CRAMUS_MOUSE f SNP A G G A A
ss47595889 NES11178388 PERLEGEN MM_PANEL2 f SNP A G G A G G A G A G A A G
ss145843982 ENSMUSSNP1924450 ENSEMBL ENSEMBL_Sanger f SNP G G A
ss322856627 CHEV_8_126720785 CHEVERUD SCREENING_POP f SNP A G
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
PWD/PhJ
SM/J
WSB/EiJ
rs31850928 SNP A G G G G A G A G A G A A G A A G G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss47595889 NES11178388 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr8:124923624 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm42054 predicted gene, 42054 within coordinates
Rr672636 regulatory region 672636 286 bp distal
Rr672637 regulatory region 672637 within coordinates
Tssr80021 transcription start site region 80021 220 bp upstream
Tssr80022 transcription start site region 80022 254 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory