rs31849719 SNP Detail

Summary

• ID
  rs31849719
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:95682676 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CAGCCAATGG CCTAGGCAGA ATTGTCTAGA ATAGTTTGTC TACTTCCCAA GCCCCTGCTC
  ACATTGCTCT GTCATGCTCA CTGCCTTGAA GATAGCAACT ACTTTTATCT TAACTGGTTC
  CTGGGAGAGA CAGGCACACT GGTAGCTCAT TATAGTGTTC AGCCGAGCAA GGCAAACCAA
  GAGGTAAAAA ACCAAGAGCC TCCCTCTGTT CATAAACATT TCTCCAGGCT CTTATTCTCT
  CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTGT
  S
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTTTTAAGT
  AGTCATCAGG GAGTTGGCAG AAATAGATGT ATAAGTGTTT TTTCCCCCCT CTGGTAAGAC
  AATATCCTAG TCCATTTGGA AGAAGAGATG ACCATGGAAA TACCCAGTCC CACACAGGTC
  TGCTGCCACT CTCCAAACAT CCGAACCTGG AAGCAGACAG TCCAAGCAAA GCCTCCTGTT
  CCCTCCCAGG ACTGTTGGCA TCTGGAGCCT GCCTCCTGTC CTGCCAGGGG TTTAGGCCAA
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45578036	mCV23460824	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs31849719					SNP	C	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:95682676 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fggy	FGGY carbohydrate kinase domain containing			Intron
				Noncoding-Transcript-Variant
Rr595472	regulatory region 595472			within coordinates