rs31836005 SNP Detail

Summary

• ID
  rs31836005
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:70319627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGCTACAT GGTGACGTCT
  TAGAAAGGGA TGATGACTTT GCTGTCTTAA CTTACGTTTT CAAAGTCCTT CATGTTCCGG
  GCTCTGGTGG GAGAAACCTT TTCTTCTGAC ATGCTTGGGA GCACTACAGA AAGGCAAAAG
  ACACAAAGGA AATCATCAGA CAAGCAGGCT GCCCAGCACT CCTACTGGGG CTGTGAGCCC
  R
  GAAGACAAAC TCATAGCAGC AATCACGATG CCCCTGCGGG CAACTTCCTG CTTGGTGGTC
  TTTACTGATG TGAGTCCAGA GAACTCTCTA AATTACATTA CTTTATTCTC AATATAGACA
  AATAGCCTAC ATTGGCCCCA ATATAACCAC GTATGTCAAG GGATGAACCC AAAACTTACA
  CAGGACATGT GACAAAGCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45576168	mCV24157715	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31836005					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:70319627 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cdk5rap2	CDK5 regulatory subunit associated protein 2			Intron
				Noncoding-Transcript-Variant
Rr593869	regulatory region 593869			1996 bp distal
Rr593870	regulatory region 593870			487 bp proximal
Rr593871	regulatory region 593871			912 bp proximal