rs31834955 SNP Detail

Summary

• ID
  rs31834955
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:109335770 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTCT ATATTCAATC AAACAAAAAA
  W
  TTTTTTTTTT GAAATAGCAT CTCAC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45575256	mCV25006146	ABI	CRAMUS_MOUSE	f	SNP	T	A
ss147197988	ENSMUSSNP2955515	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs31834955					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:109335770 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14574	CpG island 14574	1555 bp distal
Rr597332	regulatory region 597332	1162 bp distal
Rr597333	regulatory region 597333	1723 bp distal
Tssr42767	transcription start site region 42767	1965 bp upstream
Tssr42768	transcription start site region 42768	1908 bp upstream
Tssr42769	transcription start site region 42769	1846 bp upstream