rs31832054 SNP Detail

Summary

• ID
  rs31832054
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151987614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTGCGCCC AGCCTTGGGA
  CTCCGTAGAG CTACTAGCCA GGGCTGCAGG AAGCCACGCC CAAGCTTCAA GAAACCACGC
  CCAGGCTGTA GGAAGCCGCT CTCAGGACAC CTGCAGAGGT GAAGTTCAAA TGGCTTATGC
  TCCTTTATAT GATCCTCTCT AACATGCACA AGAACCGTGG GCGATCTGGT CAGGATACAG
  M
  AGGTGTGCCA CACAGCCTGG ACCTGACCCA TTTAACAAGG GCTCGGGTGT GCCAAAGCAG
  CTGGCCCACG CGGAGAGGAA ATAAAATCTT AGCAGGCAGA GAGCATTCAT TGCAGGACAC
  GGGTTGGGGG ACAGGCATGG TGATTCCCTG TCTTAAGGAC TACAGGGCAT CTCCTGAAAC
  CTGTCTTCAC CTTGCAGGTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45575620	mCV24613417	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
ss148078233	ENSMUSSNP247716	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31832054					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151987614 () rs orientation: forward

Symbol	Name	Function Class
Rr605663	regulatory region 605663	1437 bp distal
Rr605664	regulatory region 605664	1517 bp distal
Rr605665	regulatory region 605665	within coordinates
Rr605666	regulatory region 605666	891 bp proximal