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rs31832054 SNP Detail
Summary
  • ID
    rs31832054
  • Variation Type
    SNP
  • Alleles
    A/C
Genome Location and Flanking Sequence
  • Location
    Chr4:151987614 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CCCTGCGCCC AGCCTTGGGA
    CTCCGTAGAG CTACTAGCCA GGGCTGCAGG AAGCCACGCC CAAGCTTCAA GAAACCACGC
    CCAGGCTGTA GGAAGCCGCT CTCAGGACAC CTGCAGAGGT GAAGTTCAAA TGGCTTATGC
    TCCTTTATAT GATCCTCTCT AACATGCACA AGAACCGTGG GCGATCTGGT CAGGATACAG
    M
    AGGTGTGCCA CACAGCCTGG ACCTGACCCA TTTAACAAGG GCTCGGGTGT GCCAAAGCAG
    CTGGCCCACG CGGAGAGGAA ATAAAATCTT AGCAGGCAGA GAGCATTCAT TGCAGGACAC
    GGGTTGGGGG ACAGGCATGG TGATTCCCTG TCTTAAGGAC TACAGGGCAT CTCCTGAAAC
    CTGTCTTCAC CTTGCAGGTT                                            
    
    M = A/C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss45575620 mCV24613417 ABI CRAMUS_MOUSE f SNP C A A
ss148078233 ENSMUSSNP247716 ENSEMBL ENSEMBL_Sanger f SNP C A A
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs31832054 SNP C A A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:151987614 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr605663 regulatory region 605663 1437 bp distal
Rr605664 regulatory region 605664 1517 bp distal
Rr605665 regulatory region 605665 within coordinates
Rr605666 regulatory region 605666 891 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory