rs31824039 SNP Detail

Summary

• ID
  rs31824039
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144923650 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTGG AATTGCCATG TGAACCATTA
  R
  GACCATCTCT TCACAGGGCT TAACG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45574747	mCV22764433	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	A
ss147848505	ENSMUSSNP4770455	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
ss321412804	CHEV_4_144786983	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31824039					SNP	A	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144923650 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15267	CpG island 15267	1739 bp distal
Rr398672	regulatory region 398672	1862 bp downstream
Rr604321	regulatory region 604321	1585 bp distal
Rr604322	regulatory region 604322	1972 bp distal
Rr604323	regulatory region 604323	within coordinates
Rr604324	regulatory region 604324	1660 bp proximal