rs31818919 SNP Detail

Summary

• ID
  rs31818919
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:139516310 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGT GCACGGGCTA GGCTGGTCTG
  Y
  GGGAACTGGT CCACGCATGA CTCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45574408	mCV25307637	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss147681619	ENSMUSSNP1694718	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss321384508	CHEV_4_139344914	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs31818919					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:139516310 () rs orientation: forward

Symbol	Name	Function Class
Pax7	paired box 7	Intron
Rr603302	regulatory region 603302	877 bp proximal
Rr603303	regulatory region 603303	966 bp proximal