rs31815861 SNP Detail

Summary

• ID
  rs31815861
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:10007567 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  CAAAGAAGCC TGCAAGGAGT ACGAAGAGGA AAGGGCAAAG GATAATATTG AGGACAATGA
  AAAGAATGAG GTGAAGGTGA AGTTGGTGAA GGAAAAAAAG AGCAGAAGGA TGAAAAGCAG
  GAAGAGGGAG AAGAGGAGGA AGAGGAGGAG AAGGAGGAGG AGAAGAAGGG AAAGAAGTAG
  AAGAAGAAGG AGGAGAAGGA GAAGAAAGAA GGAGAAGAAA GAAGAAGAAG AAAGAAGAAG
  AAGAAGAAGG AGGAGGAGGA GGAGGAGGAG GAGGAGGAGG AGGAGAAACC CATAAAACCC
  W
  AACTTCCTTC CTTGCTTTGA CTTTCTACCT GTCAGGGCAG ATTGGCTGCT TTGGAATTTC
  ACAAAGTTCT TGTGGATCCT ACATTCTAAT AGCAAAGAAA CTTTAAATCA TTTCTGGCCA
  TAAATTTGTT CCATAGGAGG GTCTGGTCCC CTCATTATTG TTGTACCAGG CCCTCCAAAA
  AATAAGATTA ATAGCTTGCT CCCCTTACAG AAATTATTTC AAAATGAATG ATGGTTTTCA
  CATGATCTTG AGTTTTGTTT CTTAATATTT TATTGAGACT TTTTTCATCA TTGGTGCTAT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46072442	mCV25388633	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31815861					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:10007567 () rs orientation: reverse

Symbol	Name	Function Class
Gm71895	predicted gene, 71895	within coordinates
Vmn1r66	vomeronasal 1 receptor 66	mRNA-UTR