rs31808863 SNP Detail

Summary

• ID
  rs31808863
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151986577 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTCTGAGG AGTGGCCACT
  GGTAGGTTCC CAATGCTCTG GTGGATGTCC CTACATTGAC CTACAGGTGG GTAGCACTAA
  GACTTAACAG ATTATCAGAG GAGGAGGAGG AGGAGGAGAA GTCATGAAGT TGGGAGGGGA
  ATATGTTGGT CGCTTACGAA AGAAATTGTA GGAAGGTGAT ATATTCATCG TATACATGGA
  S
  ATCATTCTTC AAAAACGAAA GAAGGAGGAA TGGTGGCTGC TAGGGTCAGG GCTGGGGACG
  CTGAGTGCTT GATGAGGATA ATTTGACCAG ACGATGAGTT CCCAAGTCAG CCAGTGGGGA
  TGGGTGCCAA GCAAACTGAA CATACCCGGT GCCACTGAGC CACTGAGAAG TGGCCGAGAT
  ACTAACTTTT CTGAAGCCTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45573798	mCV24613427	ABI	CRAMUS_MOUSE	f	SNP	C	G	G
ss148078219	ENSMUSSNP428981	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31808863					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151986577 () rs orientation: forward

Symbol	Name	Function Class
Rr605661	regulatory region 605661	1911 bp distal
Rr605662	regulatory region 605662	1757 bp distal
Rr605663	regulatory region 605663	400 bp distal
Rr605664	regulatory region 605664	480 bp distal
Rr605665	regulatory region 605665	51 bp proximal
Rr605666	regulatory region 605666	1928 bp proximal