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rs31808863 SNP Detail
Summary
  • ID
    rs31808863
  • Variation Type
    SNP
  • Alleles
    C/G
Genome Location and Flanking Sequence
  • Location
    Chr4:151986577 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TCCTCTGAGG AGTGGCCACT
    GGTAGGTTCC CAATGCTCTG GTGGATGTCC CTACATTGAC CTACAGGTGG GTAGCACTAA
    GACTTAACAG ATTATCAGAG GAGGAGGAGG AGGAGGAGAA GTCATGAAGT TGGGAGGGGA
    ATATGTTGGT CGCTTACGAA AGAAATTGTA GGAAGGTGAT ATATTCATCG TATACATGGA
    S
    ATCATTCTTC AAAAACGAAA GAAGGAGGAA TGGTGGCTGC TAGGGTCAGG GCTGGGGACG
    CTGAGTGCTT GATGAGGATA ATTTGACCAG ACGATGAGTT CCCAAGTCAG CCAGTGGGGA
    TGGGTGCCAA GCAAACTGAA CATACCCGGT GCCACTGAGC CACTGAGAAG TGGCCGAGAT
    ACTAACTTTT CTGAAGCCTA                                            
    
    S = C/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss45573798 mCV24613427 ABI CRAMUS_MOUSE f SNP C G G
ss148078219 ENSMUSSNP428981 ENSEMBL ENSEMBL_Sanger f SNP C G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs31808863 SNP C G G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:151986577 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr605661 regulatory region 605661 1911 bp distal
Rr605662 regulatory region 605662 1757 bp distal
Rr605663 regulatory region 605663 400 bp distal
Rr605664 regulatory region 605664 480 bp distal
Rr605665 regulatory region 605665 51 bp proximal
Rr605666 regulatory region 605666 1928 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory