rs31803668 SNP Detail

Summary

• ID
  rs31803668
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150206156 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAACACAT TCAAGGAATT
  TGCATTTTAA TCCTTCCCAC GGCGTTTGTT TGTATGTGGC TAGGGAGGAG CAGGCATCTG
  TGCAAAATAT TATTTACCAA GGTCCGTAAC ACATGGACTG GAAGCTTGGC CTATGGCATA
  GAGGGTGGGC GTGGTCTTAG GAGGGAGAAG CACCTGTGAT TGGTTCCAGC TCATCGCCCG
  K
  TTAGCTGCAG CTAAAACCTT GGCAAGATGC TTTATTTCGA TAATTTAGTT ATAGAGACAG
  TTTGTGCATC TGAGGCTGGC CCCAAACTCC TGATCCTCCT GCCTCTAACT CCCAAGTGCT
  AGGGCTGTAG GTGTGTGCTG TCCCACCTAG GTGACTTCTC ACCTGTAAAA TGGACTGATA
  ACCACGCCCT CCCCCTGGTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45573422	mCV24960487	ABI	CRAMUS_MOUSE	f	SNP	G	T	T
ss148048082	ENSMUSSNP2352359	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31803668					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150206156 () rs orientation: forward

Symbol	Name	Function Class
Rr605189	regulatory region 605189	726 bp distal
Rr605190	regulatory region 605190	394 bp proximal
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	Intron
Tssr40374	transcription start site region 40374	994 bp downstream