rs31801270 SNP Detail

Summary

• ID
  rs31801270
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:17977798 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGAGAGCC CCTAAGGGTC
  AGGTTAGTTG ACTCTGTTGG TCTTTCTGTG GAGAAAGGAA AAGGGACAAC ATGGTTGTGT
  GTCCTCAGAA GTCTCTGCTG AGACCCACCT TCACATCCCT GGATGACCAA CTGGTGTTCC
  ATCTCATGTC TCTGTCCCTC CACACACTTA TCTCCCTCCT GCTCTCCCTC TCTGGGGAAA
  S
  GATACTCCTT ACCACTGAAG TCACTCTATC AGATCGATTT TATCTAGATC ATTTTAGGCA
  ATGGATTTGT AGGTCACACA GAATCTGATA TGGGTTGATA GTGCTATTTT TAACCATCAC
  TATCATTTGT GTGTGTGTGT TCCCGGTTCC CTGGAGATTT GTGTATTGGA ATCTTAATTT
  CTCAGTGTTG GAGTGGCCAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46070391	mCV25039048	ABI	CRAMUS_MOUSE	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31801270					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:17977798 () rs orientation: forward

Symbol	Name	Function Class
Mill1	MHC I like leukocyte 1	1474 bp upstream
Rr642879	regulatory region 642879	274 bp proximal
Tssr64734	transcription start site region 64734	1329 bp upstream
Tssr64735	transcription start site region 64735	1362 bp upstream
Tssr64736	transcription start site region 64736	1512 bp upstream