rs31799608 SNP Detail

Summary

• ID
  rs31799608
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:91372290 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gtgttgtga gctggcatgt ggacgctggg
  actcaaatcc aggtcttctg gaagagtagt acatgctctt agccactaag ctgtctcttc
  agcctcTGAA TTTACAAAGT TCTAGTGAGT TTGTCACACT CACCCAAGAG TGGCTTTTTT
  K
  GGGGGGGAGG GGGGAACTTC AGCTTACAGT TCCCCCTATT GGACAGCCAT CATATTTTGT
  GCTTGGAGAG GCCAAATGGT TTTTGTGTTA CAATTCTAGA TAGTCTTGTT CGTTCCTAGA
  ATCTGCTAAG GATGAGGCTG ACTAGGTAGG                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45572177	mCV24374383	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss146985415	ENSMUSSNP5032853	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		G
ss321206993	CHEV_4_91150744	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31799608					SNP	T	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:91372290 () rs orientation: forward

Symbol	Name	Function Class
Rr595271	regulatory region 595271	1772 bp distal