rs31799228 SNP Detail

Summary

• ID
  rs31799228
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142985765 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCC CCAGCCCCTC TTGCTTTGCA
  R
  GAACACTCAT GGAACAGACT TAAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45572260	mCV25307918	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss321403515	CHEV_4_142849098	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31799228					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142985765 () rs orientation: forward

Symbol	Name	Function Class
Rr604180	regulatory region 604180	106 bp distal
Rr604181	regulatory region 604181	395 bp distal
Rr604182	regulatory region 604182	539 bp proximal