rs31791779 SNP Detail

Summary

• ID
  rs31791779
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:138456520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGCACAGCTC CTTAGAAATC ACCTTCCTGA GAGATTCTCA ACAGAGAAGT TTCTGGATAA
  TAAAATGGAG CCACCAAAGA GACACAGTGT TCCATTGCTC CCTGCATCTC TCTGGAACAT
  AACCAAGCAT GTCTCGACAC ATCCTGTCTG GTTAAAGGGA ATACATCAAA CTGTCACTCA
  CTTTGGCCCC ATGTTGACCA AGCACTTTCA CACCAGGAAT CTAGAATCTT GCTGGCGCCA
  TAGAAGACAA AGGTCATTGG CTCCACTTCA CAGACGGGAA GCTCGGGGTC CTGCAGCTTA
  R
  GTCCACTGAC AGGAAATATT GGGTCTCTGC CAACTCTCTT TGACACAGAC TCAGAGTTCA
  TCGCTCCCCA CCACTGCTGC CTCTTACACA AAGCCAAAGT CAGCAGCTGT GCTTGGGCAC
  AATGTTGTTG ACAGAAGTCA AGGCCCCTAT GGGGCTCTTG GTCTATGCCT GGGCTCTGTT
  TGTCTGTAGT CAGCTCCTCG GTCCTTTGGA CCTTCCTTGG GATCATCTCA TTAGCTAAGG
  ACACAGTTGG CACTTCAGTT GGATCTCATT ACCGGAACAG CACTCCAGGC CCCTTTGTTT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45571375	mCV24059865	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31791779					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138456520 () rs orientation: forward

Symbol	Name	Function Class
Pla2g2c	phospholipase A2, group IIC	Intron
Rr603003	regulatory region 603003	within coordinates
Ubxn10	UBX domain protein 10	Intron