rs31786922 SNP Detail

Summary

• ID
  rs31786922
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141408901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGTTCAGT TTAAGCCAAT
  CAATTCCTAA CGAATCCCTA ACTTCATCCA AACTTCAGAC AAAAGATTGT TTTTTTTTTT
  TTAAATGTAC TTTTTAAGAC AGGGTGTCAC TAATGTAGCT GGCCTTGACC TCAAATATCA
  CTTGCCTCCT AGAATGAACG GTATGTCAGC TTGCCTGGAC TTTTGATTTT ATTTATTATT
  S
  ACAGATCTTA AAAATCAAAA GCAACTATTT GTTGCAAAGA AAATAACAAC CAAAAGAACA
  AAGTATTTGG CAAGTGAGTC CAACTTATTC AAAGTACTCC TAAGAGCAAC ACCTGTATAA
  TCACTGATTT ATCAAACTGC TTCTAAAAAT AGCATACAAG TACATACATC AAAAGCTATC
  GTAATGAAAT CTTTTCCAGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45570663	mCV24075762	ABI	CRAMUS_MOUSE	f	SNP	G	C	C	C
ss147741825	ENSMUSSNP3039685	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss321388966	CHEV_4_141237505	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31786922					SNP	G	C	C	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141408901 () rs orientation: forward

Symbol	Name	Function Class
Ddi2	DNA-damage inducible protein 2	mRNA-UTR
Rr377311	regulatory region 377311	1318 bp downstream
Rr603858	regulatory region 603858	203 bp proximal
Rsc1a1	regulatory solute carrier protein, family 1, member 1	1973 bp downstream