rs31778453 SNP Detail

Summary

• ID
  rs31778453
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:74468497 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGTAGACA AGTTCTTTTA
  TACACATTTT AAGAATTCTA AACTGTAGGG TTTTAGAAAA AAACCCATTA TCTCTCAGTT
  TATAATTTCT TTTTTGTTTT ACTGACAGGG TGTTTCTTCT TAGGTACCCC AGGTAGTCTG
  GACCTGATCA GAGGGGATAC TTTCACCCCT CTAAGTGCTA GGATCAGAGG CGTACACCCC
  M
  ACTTGTGAGT CCTGATTTAA CTATCATTCC GGTAGAATGC GGTCTGTATG ACAAATGCTC
  TGTTGCATAA GATATGACCA TTCTCATGAA TATTCAATGC ACATTTTCTC AGCCCAGAGT
  AGAGTCACTG CCATGTTCAG GAAGTCTAGA TGGTCAATTT TATGGCTCAA ATCTATACTT
  CTGTGATCTA TTAAAATCGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39325331	mCV22971266	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	A	A
ss148147047	ENSMUSSNP5842531	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31778453					SNP	C	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:74468497 () rs orientation: forward

Symbol	Name	Function Class
Tssr131567	transcription start site region 131567	1169 bp upstream