rs31777844 SNP Detail

Summary

• ID
  rs31777844
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:143055782 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCAC TGATATACAT GTAAAAATAG
  Y
  AAAATAATTT TTAAAAGACA CAAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45569578	mCV23739670	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss147780092	ENSMUSSNP3950610	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
ss321404115	CHEV_4_142919115	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31777844					SNP	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143055782 () rs orientation: forward

Symbol	Name	Function Class
Rr604198	regulatory region 604198	1270 bp proximal