rs31770437 SNP Detail

Summary

• ID
  rs31770437
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148144161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAACA GGCCATTGAG TCAACAGATC
  M
  CCCGGAGCTT GAGCTTCACA GGGTT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45569788	mCV23437533	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	C
ss147990994	ENSMUSSNP4774689	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		C
ss321416743	CHEV_4_147433813	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31770437					SNP	C	A	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148144161 () rs orientation: forward

Symbol	Name	Function Class
Gm13201	predicted gene 13201	within coordinates
Gm66468	predicted gene, 66468	within coordinates
Mthfr	methylenetetrahydrofolate reductase	153 bp downstream
Rr604567	regulatory region 604567	1956 bp distal
Rr604568	regulatory region 604568	289 bp distal
Rr604569	regulatory region 604569	519 bp proximal
Rr604570	regulatory region 604570	813 bp proximal
Rr604571	regulatory region 604571	1218 bp proximal