rs31770007 SNP Detail

Summary

• ID
  rs31770007
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149651345 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGA CCTTACCTCA AAAGGGGAGG
  R
  TGGGGCTGGA GAGATGGCTC AGCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45568881	mCV24218212	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss321426225	CHEV_4_148940997	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31770007					SNP	G	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149651345 () rs orientation: forward

Symbol	Name	Function Class
Ctnnbip1	catenin beta interacting protein 1	451 bp downstream
Gm13066	predicted gene 13066	within coordinates
Gm70645	predicted gene, 70645	766 bp upstream
Rr604966	regulatory region 604966	1316 bp distal
Rr604967	regulatory region 604967	415 bp proximal
Rr604968	regulatory region 604968	777 bp proximal
Rr604969	regulatory region 604969	892 bp proximal
Rr604970	regulatory region 604970	1706 bp proximal