rs31764484 SNP Detail

Summary

• ID
  rs31764484
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:64680957 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAATGTCAT GCCTTTAAAA
  CTAGAACACA TCAAACCTAA GTTGTCTTAT GTCGGACACA TCAGGACGGG TGTAACATAA
  AGTATTAGCG CAGTCAACTG AGTGTATGCG AATTAAAGTT GGGAGTTTGC ATGCGGTCTC
  TGTAGGTGTC ACCATTGCTT TGTACAATTC TGATGTCAGG AGCTGTCTTT TCGTTAGGTC
  R
  CAGGGTGTAT ATTTTATGCT AAATCCATGC TCAAAAATCA AAAGTGTGTC TTTAAAAGTG
  AGACGTCTCC TGGATTATTC CTTTAAAAAT AACAAATTAT ATTTGAATGA TTATATTTCT
  GTTTATGATA ATATGGATAT TTATATTTCT TCTTTGGGAA TAAATGAATC CCTTCAAGGT
  CCTAATACAG CATTGTCTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47586494	NES11437061	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G	A	G	G	A	A		G	G	A	A
ss145020195	ENSMUSSNP4679062	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G						G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31764484					SNP	G	G	G	G	G	G	G	A	G	G	A	A	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47586494	NES11437061	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:64680957 () rs orientation: forward

Symbol	Name	Function Class
D8Mit232	DNA segment, Chr 8, Massachusetts Institute of Technology 232	1627 bp proximal