rs31763795 SNP Detail

Summary

• ID
  rs31763795
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:64158240 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAAGGGGC CAGTCCTGCA
  GAACCAAAGT TGCAGGATCT CAATGACACC GAGCAACAAC AGGATGTCCA AGAGGAGTCA
  TGTGAGGATC CAGCAATGAC AGTGTAGCAG AAGCCAGAGG CTTCTGTCCA GACCAATGAC
  AAACTGCAAT GAACATTTGC AAAGTCAAGC TGTTTGGGCA AAAGGGTATA CTGTGTGACA
  Y
  ACCAGGATAC ACTGCAACTT CCACAGCGAC CCATTTTTAT TCGTTTTGTT TCTTTTTTTT
  TTCCTTTATT TTTTTCCCCA GATGGATGTT GCAAGGCAAG CGGGTAGATA CAAAGGCACA
  GAGAGATGAG TGCATGATGT GAAATTCACA TGTGATGCAT GATATGAAAT TCACATGAAT
  CAATATAAAG TTGAAAAAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39323944	mCV22698187	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss148017187	ENSMUSSNP1666473	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31763795					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:64158240 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
9130004J05Rik	RIKEN cDNA 9130004J05 gene			63 bp downstream
Asap1	ArfGAP with SH3 domain, ankyrin repeat and PH domain1			Intron
				Noncoding-Transcript-Variant
Rr503380	regulatory region 503380			814 bp distal
Rr503381	regulatory region 503381			85 bp distal
Tssr134529	transcription start site region 134529			1095 bp upstream