rs31763465 SNP Detail

Summary

• ID
  rs31763465
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:64682923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACTTCAAA GATCCCCCTG
  TCCTGCCTCT CTAGAGCTAG GATAACAGTC AGTCGTGTGC CACTACCCAG TTTTTATACG
  TGGGTTCTAG GGATCTGAAC TCAGGTCCTC CTGTTTGTTC TGCAAGCATT TTATCATCCC
  ATCTCCCACC CTCCAGTTTC ACTTGGTTGA CCAGTCGGGA CTGCATATAT TTATCGAGTG
  Y
  AATGCAATGC TTTATGCACG TGTACATCAT AGATTGAGCA GAATTGGGCT ACTTAACAAT
  CTGTCTGGAA AGCAAACTGT CCTCTGTGCT ATTCTGAAAT GCACAATGAA TTATTACTGT
  CGCTATCACA GCAGAATGTA TTCCTGCTCT AGCTGGAACT TTATGTCTGC TCACCAGTGA
  CTCCCCTGTC CCTGCTCCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss47586536	NES11436954	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs31763465					SNP	T	T	T	T	T	T	C	T	T	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47586536	NES11436954	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:64682923 () rs orientation: forward

Symbol	Name	Function Class
D8Mit232	DNA segment, Chr 8, Massachusetts Institute of Technology 232	234 bp distal