rs31762674 SNP Detail

Summary

• ID
  rs31762674
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:64682384 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTTCAAT CCCACACAGC
  ATATGCACTC TCATGTGCAC CTGCCACAAG TGCTTGGAGA AGAAAAGAAA AAAGTCAAAA
  AGGTATATGA TTTTTTCCAA AACAAAATCT TAGGAAATAC CCTTGAATAT TTCCTCACAA
  GAAAGTAAAA CAGAATAAAA TACAACCTGC AGCATATTGA CACAAGCTTC CCAGAGATGC
  Y
  GCCACAGGCT GCCAATGGCC AAGAAGAAGA CATTTAGACA GAGGTAATGA CGAGCCACAT
  GTTGCAGATC AAAATTCCCT TCAAAATTAT TTTTTCAAGT ATTTTTATTA TTATTAATAT
  ATCATCATCA TCAATTTTGT ATGTGTTTCC ATGTGGGAAC ATGTTTATGT AAAGTGGTGA
  ATGTGAACAT GCATTGATAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47586524	NES11437001	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31762674					SNP	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47586524	NES11437001	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:64682384 () rs orientation: forward

Symbol	Name	Function Class
D8Mit232	DNA segment, Chr 8, Massachusetts Institute of Technology 232	200 bp proximal