rs31753483 SNP Detail

Summary

• ID
  rs31753483
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150018299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGGAGTTC ACGACTGACC
  TAGTCTGGCT GGCTAGCAAC CTCCGGGGCT CTTCATATCT CTGCCTACCC AGCACTGGGC
  TCACAGGCAC ATGCTGGCGC GTGCACTGGG GCTTGTGTGA GTTCTAGAAG ATTAAACTCG
  GGTCCTTGTG CTTGCACGAC GAGCTCTTTA AGCACTGAGC CATGTCCCCA GGTTGAGTGG
  Y
  TTGGTGTGTT CGCGTAAATG AACTTTATGT ATTTATGGTG CTGAGGACTG AGGCAGGGCT
  GCTGGTAAGA GGAGCAAGGA CTCCTCCACG GTTCCAAGCA GAGCGTTAAA GGCTGCTTTC
  TGGCTCACGG TTTCTTCCAC CAGGCACACC CTGTTTCCTG ATCAGACTTT GCCCCCATAG
  AGCCTTTGAC ATCGGGCAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45567900	mCV23327629	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss148043459	ENSMUSSNP10660	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs31753483					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150018299 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr605111	regulatory region 605111			within coordinates
Spsb1	splA/ryanodine receptor domain and SOCS box containing 1			Intron
				Noncoding-Transcript-Variant