rs31751052 SNP Detail

Summary

• ID
  rs31751052
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:123048302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAGATGCT GAGAACTGAA
  CTTGGGGCCT CTGCAAGAGT AGTATATGCT CTTAGACACT GACCTATCTC TCTGGTCTCC
  CAAACTTATA TAAGTTTAGG ATGAACAATT GTAGACCTTT TTTAGCCTAA TAAGATGCAC
  TGGGTCATAT TCCTTTGGGT TTCTGTCTGT TTGTTGGGTT TGTTTAGTTG GCTGTTTGCT
  S
  TAGTTTGCAT AACCCAGGGG TAGTCTGTTT CTTTAAAGCA TGGTTGTTGT TATTGGTGGT
  GGGTAAATTT TCATAGGACT TGGTTGGTTC TTTGGGGCTC TTCTGTTTGC CTGTACCCAC
  ACTAGCCAAC CCAATAGGTT AGGCTGGCTG TCCTGTGAAT TCCAGGGATC GCCTGTCTCT
  GCCCACCCCC CATGCTGGAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45567335	mCV22631450	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G	G
ss147362135	ENSMUSSNP2988509	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		G
ss321289758	CHEV_4_122831752	CHEVERUD	SCREENING_POP	f	SNP						G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31751052					SNP	C	C	C	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:123048302 () rs orientation: forward

Symbol	Name	Function Class
Rr599058	regulatory region 599058	576 bp proximal
Rr599059	regulatory region 599059	687 bp proximal
Rr599060	regulatory region 599060	951 bp proximal