rs31739086 SNP Detail

Summary

• ID
  rs31739086
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:132918638 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCGCTGTTG CTATTTGGGG TAGATTTAAG ACATTATTTT
  TTCAAACTGT AAAGTAATAT ATATTTGTAA TAATAACTAT TATCAAAGAT AAGTACATAG
  W
  GTTAAGTACA TAGAGTTCAG AGCCAGAAAA AAAATGTGAA TTCAAATTTT GCCTCTACTA
  TTTGTTAGAG CTGTTTTCTT CAGCAAAGTC TAACATTTT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45565440	mCV24282942	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	T
ss135917373	ENSMUSSNP16592	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31739086					SNP	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:132918638 () rs orientation: forward

Symbol	Name	Function Class
Arhgef38	Rho guanine nucleotide exchange factor 38	Intron
Rr585514	regulatory region 585514	964 bp distal
Rr585515	regulatory region 585515	632 bp proximal