rs31735059 SNP Detail

Summary

• ID
  rs31735059
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:120899753 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTG GGGTTTGGGT TTTTTTATTT
  K
  GGGGGTTTTT TTGGTTTGTT TGTTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45565401	mCV23386573	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss135713521	ENSMUSSNP4783560	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss320902604	CHEV_3_120809022	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31735059					SNP	T	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:120899753 () rs orientation: forward

Symbol	Name	Function Class
Gm65499	predicted gene, 65499	820 bp upstream
Rr397968	regulatory region 397968	962 bp downstream
Rr584004	regulatory region 584004	512 bp distal
Rr584005	regulatory region 584005	1076 bp distal