rs31734719 SNP Detail

Summary

• ID
  rs31734719
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101051835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGATTTTCC TTTCCTACAA
  GGCTTTCACA GGTATTTGGC AAGCAAAGGC CTCTTGCTAC CTCAGCAGGC TGGCAAGAAG
  GGAGGCCCCC ATTGGCCCCA GTGGGGAAGC TGGTTATCCA TCCAAGGATG TGGAGACGCC
  TGCTGCTGCA GCTGTAAGGC TGGCAGCTGA GGTGGACGCA ACTGCAGATG CCACAGCTGG
  Y
  TCTGCCCAGA GCTCAGAGTC ACATGGCGGC TGCCCTGTGC CAACCACTCC ATTCTGCATG
  AGATCACATC TTTTGACTTT TCCTGTGCAC ACAGCTGGCT GGGCTCGTTC CACCAGGACA
  GAGGACAAGA CCTAGCTGCT CTTCTTGCTG TGGCTCCTCT CAGCTCTGAA ACATGGCAGC
  TTGTGTGCTA TGTGTGACTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45565601	mCV25367559	ABI	CRAMUS_MOUSE	f	SNP		C			T		T
ss46811657	NES10722007	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	T		C	T	T	T		T	T	C		C
ss320851099	CHEV_3_100948442	CHEVERUD	SCREENING_POP	f	SNP										C				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31734719					SNP	T	C	C	T	T	C	T	T	T	C	T	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46811657	NES10722007	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101051835 () rs orientation: forward

Symbol	Name	Function Class
Rr581969	regulatory region 581969	371 bp proximal