rs31731400 SNP Detail

Summary

• ID
  rs31731400
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:74470960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATGCTTGG TAGGTGGACA
  TCCCATCACT GAGCCGTCTC CTACTTGCTC TCTCAGCCTT GAGTCCGGGG TGCAGAAAGC
  TTCCCGCACT GGCCTGGAAT AAATGATCCT CTAGCCTCAG CCTTCCAGTC TCTGGGCTTG
  CATAGTTGGC AGCCTTTACA GGCAGGCGTC TTCGGTTTCT GTGCACACAT GTAGATGCAT
  R
  TAGAGACCAG GGAAAGGCAC CTAGTATCTT CCTCTATTGC TCTCTCCACA TTATATTATT
  ATTATTCTTT ATCATTATTA TTATTATTAT TGTTGTTGTT GTTGTTTGTT ATTATTATTA
  CTATTATTGT TATTGTTATT GTTATTATTA TTATTATTAT TATTATTATT ATTATTATTA
  TTATTATACT TCCACTAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39319709	mCV22971257	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148147062	ENSMUSSNP6588948	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31731400					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:74470960 () rs orientation: forward

Symbol	Name	Function Class
Tssr131567	transcription start site region 131567	1283 bp downstream