rs31728679 SNP Detail

Summary

• ID
  rs31728679
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:10460211 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAG TTTCTAAACA GTCCACTTCC
  Y
  CCGTATCCTA ATAATGTTTG TTTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45564440	mCV25007047	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss134582251	ENSMUSSNP2098695	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
ss320653545	CHEV_3_10395151	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31728679					SNP	C	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10460211 () rs orientation: forward

Symbol	Name	Function Class
Gm66278	predicted gene, 66278	within coordinates
Rr573635	regulatory region 573635	524 bp proximal
Rr573636	regulatory region 573636	609 bp proximal