rs31718356 SNP Detail

Summary

• ID
  rs31718356
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:90568059 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGGCAGGA AGCCCTCATT
  CATAAACACC TTTAAGTTCA GTGAGCCCGA GGAGAGGTGT TAAGTGGCAT ATGTGCCTCA
  GTTTCCTTAT GCTTTACACA GGGAAAATTT TACTTGTAAA GTTTACTCTA CTAGACTTCC
  AAGAGTATCA AAAGAATCAG CAGATGTAAA CACACTTTAA AAAGAGATGT GTTGCTTTGG
  R
  GTAAGGTGAT GTATGCATAA TCAAGTAAAA CCATGCCTGG TGGAGAATAT GTATAAACTA
  TGGGCTGATT ACTGGATAGA AACTTGTGAT ATAACATTGA GTTCTATTTT GTTATCTTTT
  ATCATGGTGG ATGCATACCA TTCCCTCTTA CAAAAGAGAC TTATTGGACA GTGGATAAGG
  GCTTGTGAGG AACAGAGGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45563240	mCV24984124	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss135478362	ENSMUSSNP6358583	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31718356					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:90568059 () rs orientation: forward

Symbol	Name	Function Class
Tssr946	transcription start site region 946	762 bp downstream
Tssr30264	transcription start site region 30264	1092 bp downstream
Tssr34247	transcription start site region 34247	1316 bp upstream
Tssr34248	transcription start site region 34248	1304 bp upstream