rs31714450 SNP Detail

Summary

• ID
  rs31714450
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:189856008 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAA AATAATGTAT TTTCAGAATA
  K
  AATACATGTT GGGCTTCTAC ATGAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45062691	mCV23934375	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss146496082	ENSMUSSNP2257353	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss320192326	CHEV_1_191947690	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31714450					SNP	G	G	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189856008 () rs orientation: forward

Symbol	Name	Function Class
Gm69899	predicted gene, 69899	1545 bp upstream
Prox1	prospero homeobox 1	Intron
Rr425913	regulatory region 425913	121 bp distal
Rr425914	regulatory region 425914	1231 bp proximal
Rr425915	regulatory region 425915	1556 bp proximal