rs31710835 SNP Detail

Summary

• ID
  rs31710835
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:36118775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAACT CAGTACATAG GCAACAACAA
  Y
  CTGCCAAAAC CCTAACCTGC CAAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45562458	mCV22322135	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T	T
ss134777610	ENSMUSSNP4606517	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31710835					SNP	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:36118775 () rs orientation: forward

Symbol	Name	Function Class
Acad9	acyl-Coenzyme A dehydrogenase family, member 9	1353 bp upstream
Cpgi13079	CpG island 13079	1242 bp proximal
Rr397642	regulatory region 397642	within coordinates
Rr575304	regulatory region 575304	within coordinates
Rr575305	regulatory region 575305	555 bp proximal
Rr575306	regulatory region 575306	735 bp proximal
Rr575307	regulatory region 575307	863 bp proximal
Tssr28859	transcription start site region 28859	1358 bp upstream
Tssr28860	transcription start site region 28860	1420 bp upstream
Tssr28861	transcription start site region 28861	1438 bp upstream
Tssr28862	transcription start site region 28862	1485 bp upstream