rs31709847 SNP Detail

Summary

• ID
  rs31709847
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:37067499 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GATTTgcaa aaaccacagc tctcagctta
  gagggtataa gcaagcctgt tctggagcca ttttgaatag ctgtggccct gtacaacaca
  gatttagttt accccaaact ccatgttcca acgtggaagc agtttcatga acttttcata
  R
  aacaaagaaa gtcacaaatc atgataaatt taaagtacct tggagggcac accagagaag
  caggcacggt gagagtgggg aaagcttttc aagatgctgt gggacattct tagcctttgg
  attggtggag gctagttgtc cgtctatctt                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45061475	mCV22616498	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss148933939	ENSMUSSNP3906874	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss319690276	CHEV_1_37085263	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31709847					SNP	G	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:37067499 () rs orientation: forward

Symbol	Name	Function Class
Gm70545	predicted gene, 70545	within coordinates
Rr409463	regulatory region 409463	187 bp proximal
Rr409464	regulatory region 409464	977 bp proximal
Tssr6295	transcription start site region 6295	889 bp upstream
Tssr6296	transcription start site region 6296	929 bp upstream
Vwa3b	von Willebrand factor A domain containing 3B	Intron