rs31697012 SNP Detail

Summary

• ID
  rs31697012
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:32561623 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACCCTTTCTT TTCTACTACC TCCGGTGGGT GGTGGGCTAG AAGGGAGGTT AAAGCATTTA
  AGAACCATCA TTAAAAGTAG GCTTTGACTA GGTTCAAGGC CAGGCTGATC TACATGGTGA
  GTTCCAGGGT AGCCAGGGCT ACAGAGAAAC CCTGTCTCAA AAAAAAAAAA AAAAAAAAAT
  GAAGCCTACA TTTCTTTGTG GTCAACTTGA CTATATCTGG AATGGACTAC AATGCAGACA
  TGGATTTCAG ATCCTGAGGC TGGTATACAC AAGCTTTTGA CCCAGAGTTT GAGGCTGGAA
  R
  ACACACACCT TTAATCCAGA TCTTGAGGCA CATCTTTAAT CTGGGCCACT CCTTCTGCTG
  GAGGCCTACA TACCAGAAGA AGGAAGTCAC CTTCTTCTTT ACCTGCTTGC ATTCACTTTG
  CCAGCACATC CATTGGAGCC TACTTCTTCA GAATTACAGT TTCTACAAAG GCCAGCTGAA
  ACACCCAGAC TCATGAGGCT GAGCCACTAC TAGGTTCTAG AACTTCCCAT TCATAGCTGG
  CCATTGTTGG AGTGCAGCCT GCACACACAC ACACACACAC ACACACACTG TGTGTGTGTG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45561753	mCV23140728	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs31697012					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:32561623 () rs orientation: forward

Symbol	Name	Function Class
Rr574974	regulatory region 574974	1029 bp proximal
Rr574975	regulatory region 574975	1377 bp proximal