rs31697007 SNP Detail

Summary

• ID
  rs31697007
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:152063179 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AATTGCATTT GATTGGTATT AAAATAAAAG ACACAAATTT TGGTGGGTAG GAAAGGAGAG
  GTGGATTTGG GGAAGAGTTG AGGAAGGGAG AAAATAATGA TCAAAGATGT GTGAAATTCT
  CAAAGAACTA TTAAGTCAGG TGTGTGGAAC ACACTTTTAA TCCCAGCACT TGGAAGGCAA
  AGGCAGGTGG ATCTTGATGA GTTTGAAGCC CATCTGATCT ACATAATGAG TCCCAGGACA
  GCCAGAGCTC CCTGGTGAGA CCCTGTCTCA AAAAACAGGC AAACAAAACA AGCCTGTGAT
  R
  TTGTGCATCG TCATTTCCAG CACTTGGGAG GCAGAGACCA GAGGGTCTTT TATGAGTTTA
  GGCCAGTCTG GTCTACTCAG TGACTTCCAG GGCAGCCAAA CTACACAGTG AAACTTTGTC
  TCAAATCAAT CTACCCATCG ATCAGTCAGT CATGAAAATT TATTTATTCC ACCGGCTGCA
  GGTGTGTCTG AACATTTTTG GCAGGGAGAG CATGTATATT CCTTATTTTA TCTTTTCTTT
  AGCCAGTTTT AGCTTGTTAA GATTTTGTAA TTAAGTTTTG GGTCACCTTT TCTGTAGGTT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45561748	mCV25311393	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss136102686	ENSMUSSNP1201864	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31697007					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152063179 () rs orientation: forward

Symbol	Name	Function Class
Rr587538	regulatory region 587538	1526 bp distal
Rr587539	regulatory region 587539	371 bp distal
Usp33	ubiquitin specific peptidase 33	Intron