rs31696862 SNP Detail

Summary

• ID
  rs31696862
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:57375619 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCC CTGCCCTGCC CTGCCCTCCC
  K
  CAGGTGATGG GATAAATATA AGATG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45560455	mCV22290759	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss135201492	ENSMUSSNP3790785	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		T
ss320780667	CHEV_3_57272120	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31696862					SNP	G	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57375619 () rs orientation: forward

Symbol	Name	Function Class
Rr1931	regulatory region 1931	1923 bp proximal
Rr375020	regulatory region 375020	1880 bp upstream
Rr577103	regulatory region 577103	1612 bp distal
Rr577104	regulatory region 577104	1931 bp proximal
Wwtr1	WW domain containing transcription regulator 1	Intron