rs31693494 SNP Detail

Summary

• ID
  rs31693494
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130731670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAGTTCTAC CACCTTGAAA GTAAGTCTAA CTAATTAATA
  AATTACAGTA TATTCACATG ATACACAATA AGGCAAAGGA CTGACAACAT GGGGATAAAT
  R
  TTAATTATAA ATGTTACATT TTCTTAAATA GCAGCATAGA AAACTGTCAG TATGTTCACA
  AGCAATAAAG TAGAATTGTT TCATATATTT TGATACAAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45561601	mCV23363381	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss135902550	ENSMUSSNP5937038	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs31693494					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130731670 () rs orientation: forward

Symbol	Name	Function Class
2010110G14Rik	RIKEN cDNA 2010110G14 gene	684 bp upstream
Gm64594	predicted gene, 64594	1115 bp downstream
Gm64601	predicted gene, 64601	1624 bp upstream
Rr367556	regulatory region 367556	779 bp downstream
Rr585240	regulatory region 585240	1278 bp distal
Rr585241	regulatory region 585241	731 bp distal
Tssr31681	transcription start site region 31681	1420 bp downstream