rs31682248 SNP Detail

Summary

• ID
  rs31682248
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153668123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCTG GACTTGAACT CATAAATCTA
  Y
  CCACCTCTTC CTCGTGGGTG CTGGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45559425	mCV23501182	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss136115424	ENSMUSSNP162431	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss321031960	CHEV_3_153625450	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31682248					SNP	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153668123 () rs orientation: forward

Symbol	Name	Function Class
Gm64825	predicted gene, 64825	within coordinates
Rr587807	regulatory region 587807	199 bp distal
Rr587808	regulatory region 587808	278 bp distal