rs31675295 SNP Detail

Summary

• ID
  rs31675295
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119541935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTAGCCTT GGCTTCTCTG
  GAACTCACTC TGTAGACCAG GCTGGCTTGA CCTCGAATTT ACAGAGATCC ACCTGCCTCT
  GCCTCCTGAG TGCTGGGATC AAAGGAGCGC ACCACCACCT CCCCGCTCAC ATTTATTTTT
  AAAGAATAGA CCAGAATGGT CCCTATTCCA GGTGCACAGG GAAGGATGTG AGTGAGCCGT
  M
  TGCCCAGGCA AGGATGGGAA AGGTGAAATG CCTGCAGATT CAATGACACA AAATCACAGG
  GACCTAGTAG GGCAGAGATG TCTTTATGAG TTCTGAGTGT TGGAAAGTAA GTGCTAAGAC
  CAGAAGCTGG GCTGAGTGGA ACCTGGGCCT GGTAGGGCCA TTAAGGGGAG TGTGGAGCAG
  ACTTGGGCTG GAGAGAAGCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
ss48076555	NES11868215	PERLEGEN	MM_PANEL2	f	SNP	A	A	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
rs31675295					SNP	A	A	C	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48076555	NES11868215	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119541935 () rs orientation: forward

Symbol	Name	Function Class
Gm44317	predicted gene, 44317	1250 bp upstream
Rr637714	regulatory region 637714	1296 bp distal
Rr637715	regulatory region 637715	546 bp proximal