CCACG CCTTGTCTTT GGCTTTACCT Y CATGAGCCCA CATCCTTGAC CTTGA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37803172 | NES09113740 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | C | C | C | C | T | C | T | C | C | C | C | T | |||
ss45679271 | mCV24946809 | ABI | CRAMUS_MOUSE | f | SNP | T | C | ||||||||||||||||
ss148011669 | ENSMUSSNP3767860 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | |||||||||||||||||
ss321421242 | CHEV_4_147943899 | CHEVERUD | SCREENING_POP | f | SNP | T | T | ||||||||||||||||
SNP Consensus Information | |||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
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rs3167257 | SNP | C | T | C | C | C | C | C | C | T | C | T | T | C | C | C | C | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37803172 | NES09113740 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr4:148654247 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Exosc10 | exosome component 10 | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Gm13204 | predicted gene 13204 | within coordinates | ||||||
Rr604704 | regulatory region 604704 | 1001 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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