rs3167231 SNP Detail

Summary

• ID
  rs3167231
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148642157 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAAA AGCATATATG TGTATGACTG
  R
  CTTTCTGTTC ATCATTTTGT AAATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45671727	mCV24946343	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss148011338	ENSMUSSNP2951518	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss321421169	CHEV_4_147931809	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs3167231					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148642157 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15305	CpG island 15305	475 bp proximal
Exosc10	exosome component 10	729 bp upstream
Gm23318	predicted gene, 23318	1896 bp downstream
Mtor	mechanistic target of rapamycin kinase	17 bp downstream
Rr398859	regulatory region 398859	522 bp upstream
Rr604703	regulatory region 604703	239 bp proximal
Tssr40280	transcription start site region 40280	722 bp upstream
Tssr40281	transcription start site region 40281	789 bp upstream
Tssr40282	transcription start site region 40282	1035 bp upstream