rs31670899 SNP Detail

Summary

• ID
  rs31670899
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:100587016 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGGG GTGGGGGTGG GGGTGGAGAA
  R
  ACCTTTGTTG GAATCTGCAT TGCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46056665	mCV24678654	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss145542784	ENSMUSSNP4150473	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31670899					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:100587016 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19492	CpG island 19492	386 bp proximal
P2ry6	pyrimidinergic receptor P2Y, G-protein coupled, 6	mRNA-UTR
Tssr68182	transcription start site region 68182	1071 bp upstream
Tssr73796	transcription start site region 73796	401 bp downstream
Tssr73797	transcription start site region 73797	473 bp downstream
Tssr73798	transcription start site region 73798	622 bp downstream
Tssr73799	transcription start site region 73799	990 bp downstream
Tssr73800	transcription start site region 73800	1019 bp downstream
Tssr73801	transcription start site region 73801	1088 bp downstream
Tssr73802	transcription start site region 73802	1218 bp downstream
Tssr73803	transcription start site region 73803	1297 bp downstream
Tssr73804	transcription start site region 73804	1319 bp downstream