rs31667575 SNP Detail

Summary

• ID
  rs31667575
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119476581 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACCAGGCT GAAGCCTAGG
  CAGGGTTTCC AGGCAGGGCA AGGCAGCTTC TGCTGACAGT GCACTGGCAA GGCCACACCC
  CCAAAGCTTC CTGCTCACAT CCAATTGTTC ACGCAGGCAC AGGCAAGAGG CAGGACTTCA
  AAGCATGCGG CTGTATGCTT TGTTTTTAAA TTCCCTGAAG CTCCTGGATC AATGAGAAAG
  R
  CCCTGAAACC TCCTTCAGCT TTTTACAAAA CTGGGTGGCC GTGTCCTCTG TCCCCACCCC
  CTCAGGTGCC TACCACGACA CCAACTTTTA ACTGGACACA GATTTTCATC TGACCCACCA
  CTTTGCCAGT GTGGTCTTTG AGTGACCCAC ACTCGCCAGA TATGCATTTG GGGAGAACAG
  TGTTCACCAC CCACTTATCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ	PWD/PhJ
ss48076095	NES11869924	PERLEGEN	MM_PANEL2	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ	PWD/PhJ
rs31667575					SNP	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48076095	NES11869924	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119476581 () rs orientation: forward

Symbol	Name	Function Class
Gm68838	predicted gene, 68838	within coordinates
Rr637703	regulatory region 637703	within coordinates
Rr637704	regulatory region 637704	593 bp proximal
Wnt5b	wingless-type MMTV integration site family, member 5B	Intron