rs31665932 SNP Detail

Summary

• ID
  rs31665932
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119475323 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACTGAGT GCACGGGGAT
  GTTCTTCTAG CCACCTCCTT AGACAGGACC TTTCCTCTGA GGAGCTTGCC CAGGGGAACA
  ATCACATTCC GATGGCTCCC CAGAAACCAA GCTCAGTCAG TTCCCTGGAG CTCACATTAG
  CTTCCTCGGT AAAGTATAAG CGCCCCCACA CCCCTGTGTG CTGATCTCCT ACTGAGAATC
  Y
  GCCTGGCAGG AGCAGGAACA TCTTGGAGAG CTTGAGGCCA GCCTGTTCTA CTATGCAAAT
  TCCAGACCAG TCAAAGGTAC ATTGTAAGAC CCTGTCTCAA AAAATGAAAC AAAACAAAAC
  AAAATAAACC ACCTGCCTTC TGGAGTGCCT ATGACCATCA GATGTGGCTC AGCAGAGACA
  GAAGGCAGAG AGGCCTGACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ
ss48076081	NES11869941	PERLEGEN	MM_PANEL2	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ
rs31665932					SNP	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48076081	NES11869941	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119475323 () rs orientation: forward

Symbol	Name	Function Class
Gm68838	predicted gene, 68838	within coordinates
Rr637703	regulatory region 637703	962 bp proximal
Rr637704	regulatory region 637704	1851 bp proximal
Wnt5b	wingless-type MMTV integration site family, member 5B	Intron