rs31665930 SNP Detail

Summary

• ID
  rs31665930
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119474976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATATGCATA AAATAAGTAA
  TAGAAAGAGA GGGACTGAGT GGCACACATT GCCTCTCTAT CTCATCCCTA GGCTTGCTAC
  TGCCCACTGC CAGGTGAATT TGGCGCACCT GGCCTCTTCA ACAGGCCACC CACGGTGTGT
  GGGGGGGTGG GGGGTGGGGC TGCCATGCCA CCTCAGGTCC TGGGTGCCAG TCCAGCTTTG
  Y
  TCCAAGTGAT TCTTGTTTCA TCTGTGAGAA GAAAAGGGAA GGCTGTGGCT TTTCCCCACC
  ATTCTAAGCC ATGCAAATGT ATACAGGAGA GATCTGCTGG GGTGCATGGA AGCCCATACA
  TTTTCTCATG TTCCTCAATG GTGACACACA CTGAGTGCAC GGGGATGTTC TTCTAGCCAC
  CTCCTTAGAC AGGACCTTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
ss48076079	NES11869940	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
rs31665930					SNP	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48076079	NES11869940	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119474976 () rs orientation: forward

Symbol	Name	Function Class
Gm68838	predicted gene, 68838	within coordinates
Rr637703	regulatory region 637703	1309 bp proximal
Wnt5b	wingless-type MMTV integration site family, member 5B	Intron