rs31663532 SNP Detail

Summary

• ID
  rs31663532
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151477317 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGAAAGGG AAGATGATGG
  GGAAGAGGAG AAGAAAGACA GGAGAATGGG AAAAGGGAGG GGGAAAAAGG GAGAGGGAGA
  TGAGAGGAAG AAATGGGGAG GAGGAGGGAA AGAGAAGAGG AAAGAGAATG GGAAAGAGGA
  GACAGGGGAG GAGGATGAAG GAGAGAGGAG GAGGTGAGAA AGAGGGAAAG GAGGAGAACT
  R
  GAAAAACAAC TGTTATAAAA CGGTCATGAA CCCAAGTGCC ATGGTTAAAT ATTTGACCCT
  GTCAGTTAAT ACAGTGAAAG CTAATCCCCG GTGTGATAAC ATTTAGAGGT GCAGCCTCAT
  GAATGAGATC GTTTCCCTTA TGAAAGAGGC TCCAAAGAGC TGCTTCCATT GCCAACACGT
  GAAAAGAGCT ATGAGGTGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45558007	mCV24030317	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss136098014	ENSMUSSNP3656880	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
ss321026840	CHEV_3_151434644	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31663532					SNP	G	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151477317 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	621 bp distal
Rr587416	regulatory region 587416	294 bp distal
Rr587417	regulatory region 587417	363 bp distal