rs31663432 SNP Detail

Summary

• ID
  rs31663432
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119467629 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTTTGTT CTAATTCACT
  TTAATTATCA AAGGAATGCA GTATATTCAC TGCCCACATG AAGCCGTCTT TGTAGAATCT
  AAAGGGGCCC GTGAAGCCAG ACCCTGATGG GTCTAAGAAG GATGTGAGGT TTCTTGCACG
  GTGTAAATGC AGAACGTAGA CGAGAGAAAG GCAGCCGAAG ACAAGCATGC ACTCAGAGCC
  K
  CGGGGCCACC CTGGCCAGAT TCCACATGCT GCAGTGAGGG GTGGGCTGAG GGCGTAGAGG
  ATGGGCTCTT GTCCTCTTGA CACTTAGAGT CTCTGAGGTC AGAGAATCAG AGCGTGGGTC
  TGAGGCAGCT GCTACTGCCA TGGGACAAAG GAGGGAAGAC TTCTACCAGC CTGTGAGCCG
  GGTGAGCCCC GATTATTAGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ
ss48076051	NES11870110	PERLEGEN	MM_PANEL2	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ
rs31663432					SNP	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48076051	NES11870110	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119467629 () rs orientation: forward

Symbol	Name	Function Class
Rr637698	regulatory region 637698	291 bp distal
Rr637699	regulatory region 637699	739 bp distal
Rr637700	regulatory region 637700	within coordinates
Rr637701	regulatory region 637701	274 bp proximal
Rr637702	regulatory region 637702	1136 bp proximal
Wnt5b	wingless-type MMTV integration site family, member 5B	Intron