rs31662874 SNP Detail

Summary

• ID
  rs31662874
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156365617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTACT TCCATGTTCC TGCTTTGAGT
  Y
  CCCTCCCTGA GTTCCCTGTG TGCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45057496	mCV25423510	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss145798919	ENSMUSSNP4865635	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31662874					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156365617 () rs orientation: forward

Symbol	Name	Function Class
Rr421192	regulatory region 421192	525 bp proximal
Rr421193	regulatory region 421193	1946 bp proximal